STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79645.1Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. (382 aa)    
Predicted Functional Partners:
AJI79728.1
Protein of unknown function (DUF1794); May play a role in the intracellular transport of hydrophobic ligands.
  
     0.708
AJI78735.1
Hypothetical protein.
  
     0.659
AJI79344.1
PFAM: Protein of unknown function (DUF3040).
  
     0.637
AJI80109.1
Putative transcriptional regulator; PFAM: Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.
  
     0.625
AJI78308.1
Hypothetical protein.
  
     0.586
cwlM
N-acetylmuramoyl-L-alanine amidase; PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase.
 
   
 0.567
AJI80039.1
Putative integral membrane protein; PFAM: Protein of unknown function (DUF2029).
  
     0.561
divIVA
PFAM: DivIVA protein; TIGRFAM: DivIVA domain.
  
     0.553
AJI79346.1
Hypothetical protein.
  
    0.530
AJI79439.1
PFAM: Protein of unknown function (DUF3052).
  
     0.527
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.