Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI79670.1Integral membrane protein; PFAM: Domain of unknown function (DUF3817); TIGRFAM: integral membrane protein. (118 aa)    
Predicted Functional Partners:
AJI79671.1
Glucitol operon activator.
       0.832
AJI79669.1
Hypothetical protein.
       0.777
AJI79091.1
Uncharacterized protein, copper resistance protein CopC-like protein; PFAM: CopC domain.
  
    0.773
qcrC
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c; Cytochrome C oxidase, cbb3-type, subunit III.
  
     0.680
AJI79400.1
Hypothetical protein; PFAM: RDD family.
  
     0.618
AJI79637.1
Putative membrane protein; PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG); Copper resistance protein D.
  
     0.606
ctaF
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.518
AJI79476.1
PFAM: Heparinase II/III-like protein.
  
     0.468
AJI79322.1
Putative integral membrane protein; PFAM: YGGT family.
  
     0.461
AJI78688.1
Hypothetical protein.
  
    0.453
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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