Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
whiHPFAM: Bacterial regulatory proteins, gntR family; FCD domain. (235 aa)    
Predicted Functional Partners:
AJI78547.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
 
  
 0.678
AJI79313.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
 
  
 0.669
nrdF2
Ribonucleoside-diphosphate reductase class Ib beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
  
    0.652
AJI78195.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
 
  
 0.609
AJI79990.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
  
 0.527
ctaD
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
  
 0.491
AJI79535.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
  
 0.463
yagI
PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
 
  
 0.462
yhfR
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
  
 0.432
AJI79620.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
  
 0.422
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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