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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79703.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (246 aa)    
Predicted Functional Partners:
AJI79702.1
Putative ABC transport system permease protein; PFAM: MacB-like periplasmic core domain; FtsX-like permease family.
 
  
 0.997
yknZ
ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family.
 
 0.994
AJI77920.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.933
AJI77919.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
   
0.791
AJI80055.1
PFAM: FtsX-like permease family.
 
 
 0.750
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
  
 0.732
AJI79292.1
Heat shock protein Hsp15; PFAM: S4 domain.
   
    0.719
AJI78098.1
Phage shock protein C (PspC) family protein; PFAM: PspC domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
    0.673
AJI78444.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family.
 
 
 0.635
crtI
Four-step phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
  
    0.594
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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