Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI79769.1PFAM: Protein of unknown function (DUF3815); Protein of unknown function (DUF1212). (558 aa)    
Predicted Functional Partners:
AJI79770.1
Hypothetical protein.
       0.720
otsA
Trehalose 6-phosphate synthase; PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming].
       0.720
AJI79772.1
Hypothetical protein.
       0.720
otsB
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
       0.687
AJI78907.1
Hypothetical protein.
 
     0.585
AJI79991.1
PFAM: Septum formation.
  
     0.562
AJI78794.1
Hypothetical protein.
 
     0.561
AJI79797.1
PFAM: Protein of unknown function (DUF3815); Protein of unknown function (DUF1212).
  
  
 0.559
AJI80010.1
PFAM: RNase_H superfamily; TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
     0.556
AJI79053.1
PFAM: Phosphotransferase enzyme family.
  
     0.546
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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