Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AJI79778.1Poly(3-hydroxybutyrate) depolymerase; PFAM: Alpha/beta hydrolase family. (266 aa)    
Predicted Functional Partners:
AJI79775.1
ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.
       0.817
AJI79776.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
       0.817
AJI79777.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
       0.817
AJI79774.1
PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding protein-like domain.
       0.671
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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