STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79837.1Transcriptional regulator; PFAM: MarR family. (158 aa)    
Predicted Functional Partners:
AJI79838.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Bacterial transferase hexapeptide (six repeats); AMP-binding enzyme; AMP-binding enzyme C-terminal domain; TIGRFAM: non-ribosomal peptide synthetase terminal domain of unknown function; amino acid adenylation domain.
       0.824
AJI79836.1
PFAM: HicB family.
 
     0.681
sseB2
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
    0.672
AJI79835.1
Hypothetical protein.
 
     0.628
AJI79002.1
Hypothetical protein.
  
     0.564
AJI79305.1
Hypothetical protein.
  
     0.559
AJI78664.1
Hypothetical protein.
  
     0.548
AJI78307.1
PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
  
     0.529
AJI78088.1
Hypothetical protein.
  
     0.523
AJI79373.1
Hypothetical protein.
  
     0.521
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.