STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpdAAcetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain. (488 aa)    
Predicted Functional Partners:
AJI79843.1
PFAM: OPT oligopeptide transporter protein; TIGRFAM: oligopeptide transporter, OPT superfamily; putative oligopeptide transporter, OPT family.
  
    0.705
mrpF2
Multisubunit Na+/H+ antiporter, MnhF subunit; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF).
  
    0.639
mrpC2
Multisubunit sodium/proton antiporter, MrpC subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; TC 2.A.63.1.
       0.638
AJI79847.1
Multisubunit sodium/proton antiporter, MrpD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TC 2.A.63.1.
       0.638
mrpE
Multisubunit sodium/proton antiporter, MrpE subunit; PFAM: Na+/H+ ion antiporter subunit; TC 2.A.63.1.
       0.638
mrpG
PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit.
       0.638
groL2
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.571
mrpA
Multisubunit sodium/proton antiporter; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to MnhB subunit of Na+/H+ antiporter; Domain of unknown function (DUF4040); MrpA subunit (TC 2.A.63.1);multisubunit sodium/proton antiporter, MrpB subunit (TC 2.A.63.1).
  
    0.526
theD
PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase.
  
  
 0.448
dapE
Succinyldiaminopimelate desuccinylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase.
  
   
 0.437
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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