Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pknGPFAM: Protein kinase domain. (917 aa)    
Predicted Functional Partners:
AJI79865.1
Hypothetical protein.
 
  
 0.980
glnH
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
  
  
 0.980
odhI
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.974
ppp
PFAM: Protein phosphatase 2C.
 
 
 0.829
AJI79864.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
     
 0.702
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
   
  
 0.685
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.682
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
  
 0.659
AJI79862.1
PFAM: ABC-2 family transporter protein.
  
    0.631
AJI79958.1
PFAM: Cutinase.
  
     0.631
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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