Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI79915.1Esterase/lipase; PFAM: alpha/beta hydrolase fold. (388 aa)    
Predicted Functional Partners:
AJI79916.1
PFAM: Histidine kinase.
       0.777
AJI79917.1
Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
  
    0.777
AJI79592.1
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
  
     0.693
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.675
AJI79914.1
Hypothetical protein.
  
    0.601
AJI79918.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
       0.550
AJI79919.1
Hypothetical protein.
       0.521
AJI79920.1
Putative membrane protein; PFAM: Protein of unknown function (DUF418).
       0.517
lipT
PFAM: Carboxylesterase family; Belongs to the type-B carboxylesterase/lipase family.
 
   
 0.505
AJI78754.1
Hypothetical protein.
  
   0.455
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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