Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI79918.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (283 aa)    
Predicted Functional Partners:
AJI78445.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
    
0.895
AJI79919.1
Hypothetical protein.
       0.726
AJI79920.1
Putative membrane protein; PFAM: Protein of unknown function (DUF418).
       0.723
AJI77974.1
PFAM: ABC transporter.
 
   
0.651
AJI79921.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
  
 
0.604
AJI79922.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
  
  0.604
AJI79916.1
PFAM: Histidine kinase.
       0.592
AJI79917.1
Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
       0.592
AJI79915.1
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
       0.550
tetA2
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
  
  0.498
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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