STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79923.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
AJI78664.1
Hypothetical protein.
  
     0.648
AJI79924.1
Fe-S oxidoreductase; PFAM: Cysteine-rich domain; 4Fe-4S dicluster domain.
       0.540
AJI78059.1
PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
     0.521
AJI79888.1
PFAM: Bacterial regulatory proteins, tetR family; WHG domain.
  
     0.511
AJI79926.1
PFAM: Domain of unknown function (DUF1707).
 
     0.453
AJI80088.1
PFAM: Zeta toxin.
  
     0.404
AJI79925.1
Transporter, CPA2 family; PFAM: Sodium/hydrogen exchanger family; TC 2.A.37.
       0.403
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.