STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79943.1PFAM: Acyltransferase family. (399 aa)    
Predicted Functional Partners:
AJI79945.1
Hypothetical protein.
 
   
 0.885
AJI79944.1
PFAM: Protein of unknown function (DUF3068).
 
   
 0.848
AJI79244.1
PFAM: Acyltransferase family.
  
     0.732
AJI78766.1
PFAM: Acyltransferase family.
  
     0.712
AJI79947.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
 
   
 0.686
AJI79958.1
PFAM: Cutinase.
  
  
 0.586
AJI78767.1
PFAM: Protein of unknown function (DUF2029).
  
     0.582
AJI78369.1
Hypothetical protein.
  
     0.555
aftC
PFAM: Protein of unknown function (DUF2029).
  
     0.530
AJI77985.1
PFAM: Protein of unknown function (DUF3068).
 
   
 0.528
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.