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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79963.1Decaprenyl-phosphate phosphoribosyltransferase; PFAM: UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family. (333 aa)    
Predicted Functional Partners:
AJI79962.1
Hypothetical protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan- peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of arabinofuranosyl (Araf) residues residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) to the arabinan domain to form terminal beta-(1->2)- linked Araf residues, which marks the end point for AG arabinan biosynthesis before decoration with mycolic acids.
 
  
 0.942
AJI79964.1
5'-phosphoribosyl-monophospho-decaprenol phosphatase; PFAM: PAP2 superfamily.
 
  
 0.930
glfT2
PFAM: Glycosyltransferase like family 2.
  
  
 0.926
dprE1
decaprenylphospho-beta-D-ribofuranose 2-oxidase; PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain.
 
  
 0.882
atpD
ATP synthase, F1 beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.810
AJI77663.1
Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase.
 
  
 0.803
AJI78931.1
Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase.
 
  
 0.789
AJI77668.1
Putative membrane protein; PFAM: GtrA-like protein.
 
     0.739
AJI77669.1
Putative membrane protein; PFAM: GtrA-like protein.
 
     0.730
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
  
 0.654
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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