STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79982.1Uncharacterized protein potentially involved in peptidoglycan biosynthesis; PFAM: LGFP repeat; N-acetylmuramoyl-L-alanine amidase. (678 aa)    
Predicted Functional Partners:
glf
PFAM: UDP-galactopyranose mutase; NAD(P)-binding Rossmann-like domain; TIGRFAM: UDP-galactopyranose mutase.
       0.670
AJI78412.1
PFAM: Domain of unknown function (DUF1906).
  
  
 0.629
cwlM
N-acetylmuramoyl-L-alanine amidase; PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase.
   
  
 0.624
AJI79980.1
Transcriptional regulator, ArsR family; PFAM: Helix-turn-helix domain.
 
     0.549
AJI77892.1
Hypothetical protein.
  
     0.510
AJI78369.1
Hypothetical protein.
  
     0.507
AJI77759.1
Hypothetical protein.
  
     0.500
AJI79950.1
PFAM: NYN domain.
  
    0.486
AJI77985.1
PFAM: Protein of unknown function (DUF3068).
  
     0.463
AJI79271.1
PFAM: Tryptophan-associated transmembrane protein (Trp_oprn_chp); TIGRFAM: trp region conserved hypothetical membrane protein.
  
     0.409
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.