Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
srtBSortase (surface protein transpeptidase); PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein. (255 aa)    
Predicted Functional Partners:
AJI80016.1
Hypothetical protein.
     
 0.843
AJI80018.1
PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain.
     
 0.683
AJI80015.1
PFAM: Domain of unknown function (DUF2020).
  
     0.680
AJI77900.1
PFAM: Glutaredoxin-like domain (DUF836).
  
     0.666
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
   
 0.511
AJI78481.1
Putative integral membrane protein; PFAM: Putative zinc-finger.
  
     0.461
AJI78907.1
Hypothetical protein.
  
     0.461
AJI79381.1
PFAM: Domain of unknown function (DUF4191).
  
     0.423
AJI79862.1
PFAM: ABC-2 family transporter protein.
  
     0.405
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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