Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trxAPFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family. (124 aa)    
Predicted Functional Partners:
trxB
PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
 
 
 0.784
copA
P-type Cu+ transporter; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
 
  
 0.725
AJI78427.1
PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein.
  
  
 0.720
AJI80030.1
Copper chaperone; PFAM: Heavy-metal-associated domain.
  
  
 0.677
AJI80032.1
Sugar phosphate permease; PFAM: Sugar (and other) transporter.
       0.651
mtr
Mycothione reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mycothione reductase.
  
 
 0.620
AJI80028.1
Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family.
       0.620
AJI79127.1
Peroxiredoxin; PFAM: AhpC/TSA family.
  
 
 0.601
AJI77676.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.559
bcp
Peroxiredoxin; PFAM: AhpC/TSA family.
  
 
 0.520
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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