Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI80077.1PFAM: Type I restriction modification DNA specificity domain. (390 aa)    
Predicted Functional Partners:
hsdM
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
 
 
 0.998
AJI78544.1
PFAM: Methyltransferase domain.
 
 
 0.958
mrr
PFAM: Mrr N-terminal domain; Restriction endonuclease.
 
  
 0.929
hsdR
Helicase, type I site-specific restriction-modification system restriction subunit; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Helicase conserved C-terminal domain; EcoEI R protein C-terminal; Type III restriction enzyme, res subunit.
 
 
 0.920
AJI77773.1
Hypothetical protein.
  
  
 0.826
AJI80079.1
Putative Zn-ribbon-containing protein involved in phosphonate metabolism; PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA.
       0.636
AJI78654.1
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; PLD-like domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427).
 
    0.456
atpF
ATP synthase, F0 subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
   
 
 0.456
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.453
AJI80080.1
Hypothetical protein.
       0.452
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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