STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdMType I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain. (536 aa)    
Predicted Functional Partners:
AJI80077.1
PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.997
mrr
PFAM: Mrr N-terminal domain; Restriction endonuclease.
 
  
 0.935
hsdR
Helicase, type I site-specific restriction-modification system restriction subunit; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Helicase conserved C-terminal domain; EcoEI R protein C-terminal; Type III restriction enzyme, res subunit.
 
 
 0.922
AJI77773.1
Hypothetical protein.
  
 
 0.899
AJI80079.1
Putative Zn-ribbon-containing protein involved in phosphonate metabolism; PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA.
       0.638
AJI78654.1
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; PLD-like domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427).
 
   
 0.461
AJI80080.1
Hypothetical protein.
       0.458
AJI79577.1
Putative transcriptional regulator with HTH domain; PFAM: IclR helix-turn-helix domain; Divergent AAA domain; ATP-dependent DNA helicase recG C-terminal.
 
    0.409
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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