STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI80109.1Putative transcriptional regulator; PFAM: Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family. (199 aa)    
Predicted Functional Partners:
nrdE1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
   
 0.936
nrdE2
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
   
 0.936
AJI80110.1
tRNA adenylyltransferase; PFAM: HD domain; Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A; TIGRFAM: HDIG domain; tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.844
AJI80112.1
Hypothetical protein.
 
     0.775
AJI80107.1
PFAM: Branched-chain amino acid transport protein (AzlD).
       0.756
azlC
Putative branched-chain amino acid permease (azaleucine resistance); PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC.
       0.756
AJI80113.1
PFAM: MviN-like protein; TIGRFAM: murein biosynthesis integral membrane protein MurJ.
 
     0.731
AJI80111.1
NUDIX family protein; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
       0.698
AJI79050.1
RNAse H-fold protein YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
  
 0.655
AJI79663.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
   
    0.634
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.