Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AJI80111.1NUDIX family protein; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. (200 aa)    
Predicted Functional Partners:
AJI80112.1
Hypothetical protein.
 
   
 0.898
AJI80113.1
PFAM: MviN-like protein; TIGRFAM: murein biosynthesis integral membrane protein MurJ.
       0.828
AJI80109.1
Putative transcriptional regulator; PFAM: Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.
       0.687
AJI80110.1
tRNA adenylyltransferase; PFAM: HD domain; Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A; TIGRFAM: HDIG domain; tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.687
AJI80107.1
PFAM: Branched-chain amino acid transport protein (AzlD).
       0.635
azlC
Putative branched-chain amino acid permease (azaleucine resistance); PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC.
       0.635
whiB3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.538
AJI79113.1
PFAM: Protein of unknown function (DUF3039).
  
     0.514
AJI80114.1
Hypothetical protein; PFAM: YceI-like domain; Belongs to the UPF0312 family.
       0.496
cwlM
N-acetylmuramoyl-L-alanine amidase; PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase.
 
     0.491
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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