STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI80113.1PFAM: MviN-like protein; TIGRFAM: murein biosynthesis integral membrane protein MurJ. (1080 aa)    
Predicted Functional Partners:
AJI77606.1
PFAM: Protein of unknown function (DUF2662); FHA domain.
  
 
 
 0.995
AJI80112.1
Hypothetical protein.
 
     0.947
holA
PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit.
  
  
 0.823
AJI80111.1
NUDIX family protein; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
       0.820
AJI77577.1
Putative RNA-binding protein containing Zn ribbon; PFAM: Protein of unknown function (DUF721).
      
 0.812
AJI80109.1
Putative transcriptional regulator; PFAM: Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.
 
     0.731
AJI80011.1
Hypothetical protein.
  
     0.721
AJI80110.1
tRNA adenylyltransferase; PFAM: HD domain; Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A; TIGRFAM: HDIG domain; tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.696
AJI78763.1
Putative membrane protein; PFAM: DoxX.
  
     0.667
AJI78054.1
PFAM: Protein of unknown function (DUF690); TIGRFAM: type VII secretion protein EccB, Actinobacterial.
  
     0.664
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.