STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKR68257.1S-adenosylmethionine synthase. (351 aa)    
Predicted Functional Partners:
KKR67711.1
UDP-glucose 4-epimerase.
   
 0.962
KKR67683.1
NAD-dependent epimerase/dehydratase family protein.
   
 0.962
KKR67475.1
SAM-dependent methyltransferase.
  
 
 0.847
KKR67805.1
Putative dual-specificity RNA methyltransferase RlmN.
  
 
  0.839
KKR67709.1
Ribosomal RNA small subunit methyltransferase A.
 
  
 0.833
KKR68021.1
Release factor glutamine methyltransferase.
    
 0.813
KKR68033.1
Hypothetical protein.
    
 0.773
KKR67097.1
30S ribosomal protein S6.
     
 0.643
KKR66690.1
Trigger factor.
 
 
 0.610
KKR68258.1
SOS-response transcriptional repressor, LexA.
     
 0.600
Your Current Organism:
Uhrbacteria bacterium GW2011GWE24058
NCBI taxonomy Id: 1618991
Other names: C. Uhrbacteria bacterium GW2011_GWE2_40_58, Candidatus Uhrbacteria bacterium GW2011_GWE2_40_58, Parcubacteria (Uhrbacteria) bacterium GW2011_GWE2_40_58
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