STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT56699.1Repair protein RecO protein. (208 aa)    
Predicted Functional Partners:
KKT56599.1
Recombination protein RecR.
 
 0.999
KKT56698.1
Hypothetical protein.
 
     0.854
KKT56697.1
Glycine-tRNA ligase.
     
 0.833
KKT56696.1
Putative zinc protease.
  
  
 0.828
KKT56350.1
Topoisomerase protein.
  
 
 0.823
KKT56692.1
Metal-dependent DNase.
  
    0.816
KKT56695.1
Hypothetical protein.
       0.805
KKT56693.1
Hypothetical protein.
 
     0.804
KKT56344.1
Single-stranded DNA-binding protein.
   
 
 0.799
KKT56694.1
Methionine-tRNA ligase.
       0.798
Your Current Organism:
Wolfebacteria bacterium GW2011GWA14424
NCBI taxonomy Id: 1619002
Other names: C. Wolfebacteria bacterium GW2011_GWA1_44_24, Candidatus Wolfebacteria bacterium GW2011_GWA1_44_24, Parcubacteria (Wolfebacteria) bacterium GW2011_GWA1_44_24
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