STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT56361.1Type II secretion system protein E. (576 aa)    
Predicted Functional Partners:
KKT56363.1
Type II secretion system F domain protein.
 
 0.996
KKT56359.1
Hypothetical protein.
  
 
 0.957
KKT56357.1
Type IV pilus assembly protein PilM.
  
 
 0.928
KKT56362.1
Twitching motility protein.
  
 
0.921
KKT56364.1
Hypothetical protein.
  
 0.904
KKT56366.1
Hypothetical protein.
  
 0.887
KKT56368.1
Hypothetical protein.
  
 0.887
KKT56617.1
Hypothetical protein.
  
 0.783
KKT56693.1
Hypothetical protein.
  
 0.783
KKT56768.1
Holliday junction ATP-dependent DNA helicase RuvA.
    
  0.781
Your Current Organism:
Wolfebacteria bacterium GW2011GWA14424
NCBI taxonomy Id: 1619002
Other names: C. Wolfebacteria bacterium GW2011_GWA1_44_24, Candidatus Wolfebacteria bacterium GW2011_GWA1_44_24, Parcubacteria (Wolfebacteria) bacterium GW2011_GWA1_44_24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.