STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (304 aa)    
Predicted Functional Partners:
pyrI
Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase.
 0.999
KKQ41090.1
Dihydroorotase.
 0.999
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate.
  
 
 0.999
pyrE
Phosphoribosyltransferase, Orotidine 5-phosphate decarboxylase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 
 0.999
KKQ41095.1
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).
  
 
 0.999
KKQ41093.1
Putative dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit.
  
 
 0.964
KKQ41086.1
Bifunctional purine biosynthesis protein PurH.
  
 
 0.892
KKQ41091.1
Ornithine carbamoyltransferase.
 
  
0.881
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.786
KKQ41087.1
Inosine-5'-monophosphate dehydrogenase.
  
  
 0.753
Your Current Organism:
Magasanikbacteria bacterium GW2011GWA2378
NCBI taxonomy Id: 1619036
Other names: C. Magasanikbacteria bacterium GW2011_GWA2_37_8, Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8, Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_37_8
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