STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ41000.1Hypothetical protein. (471 aa)    
Predicted Functional Partners:
KKQ41001.1
Copper-translocating P-type ATPase CopA.
 
 0.998
KKQ40999.1
Hypothetical protein.
  
  
 0.871
KKQ40998.1
Hypothetical protein.
       0.708
KKQ40179.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.707
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.634
KKQ40939.1
Hypothetical protein.
 
 
   0.507
KKQ39244.1
Hypothetical protein; Belongs to the helicase family. UvrD subfamily.
 
    0.487
KKQ41044.1
Hypothetical protein.
  
  
 0.481
KKQ40997.1
DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family.
       0.481
KKQ41135.1
Glutaredoxin-like protein, YruB-family.
     
 0.470
Your Current Organism:
Magasanikbacteria bacterium GW2011GWA2378
NCBI taxonomy Id: 1619036
Other names: C. Magasanikbacteria bacterium GW2011_GWA2_37_8, Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8, Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_37_8
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