STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ39728.1Nitrogen-fixing NifU domain protein. (225 aa)    
Predicted Functional Partners:
KKQ39727.1
Cysteine desulfurase.
 
 0.999
KKQ39726.1
Transcriptional regulator, BadM/Rrf2 family.
  
 
 0.982
KKQ39730.1
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.965
KKQ39104.1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
  
 
 0.965
KKQ39105.1
Chaperone protein DnaK.
  
 
 0.965
KKQ40642.1
Phospholipase D/Transphosphatidylase.
  
 
 0.936
KKQ40733.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.845
KKQ40910.1
ABC-type nitrate/sulfonate/bicarbonate transport system periplasmic component-like protein.
  
 
 0.829
KKQ40497.1
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate.
    
 0.791
KKQ40912.1
Hypothetical protein.
  
 
 0.781
Your Current Organism:
Magasanikbacteria bacterium GW2011GWA2378
NCBI taxonomy Id: 1619036
Other names: C. Magasanikbacteria bacterium GW2011_GWA2_37_8, Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8, Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_37_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.