STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS52132.1Collagenase. (406 aa)    
Predicted Functional Partners:
KKS52131.1
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein.
 
     0.938
KKS52134.1
Hypothetical protein.
       0.801
KKS52133.1
Prolipoprotein diacylglyceryl transferase.
       0.790
KKS52135.1
Hypothetical protein.
       0.628
KKS52136.1
Glutamyl-tRNA(Gln) amidotransferase subunit A.
       0.544
KKS53348.1
Hypothetical protein.
     
 0.500
Your Current Organism:
Magasanikbacteria bacterium GW2011GWC24227
NCBI taxonomy Id: 1619049
Other names: C. Magasanikbacteria bacterium GW2011_GWC2_42_27, Candidatus Magasanikbacteria bacterium GW2011_GWC2_42_27, Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_42_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.