STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ71925.1Orotidine 5''-phosphate decarboxylase. (316 aa)    
Predicted Functional Partners:
KKQ71923.1
Orotate phosphoribosyltransferase.
 
 
 0.999
KKQ72153.1
Carbamoyl-phosphate synthase, large subunit.
 
  
 0.986
KKQ71918.1
Aspartate carbamoyltransferase.
  
 
 0.973
KKQ71919.1
Dihydroorotase, multifunctional complex type.
  
 
 0.973
KKQ71912.1
Carbamoyl-phosphate synthase, small subunit.
  
  
 0.957
KKQ72252.1
Bifunctional GMP synthase/glutamine amidotransferase protein.
    
 0.876
KKQ71920.1
Dihydroorotate dehydrogenase.
  
 
 0.826
KKQ70862.1
Dihydroorotate dehydrogenase 2.
  
 
 0.826
KKQ71924.1
Hypothetical protein.
       0.675
KKQ70898.1
30S ribosomal protein S1.
    
  0.659
Your Current Organism:
Peregrinibacteria bacterium GW2011GWA23836
NCBI taxonomy Id: 1619055
Other names: C. Peregrinibacteria bacterium GW2011_GWA2_38_36, Candidatus Peregrinibacteria bacterium GW2011_GWA2_38_36
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.