STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ71450.1Cartilage oligomeric matrix protein. (762 aa)    
Predicted Functional Partners:
KKQ71964.1
Repeat protein.
 
 
  0.773
KKQ70837.1
PKD domain protein.
 
  
  0.740
KKQ71669.1
Protein psiN.
  
     0.691
KKQ70836.1
Hypothetical protein.
 
  
  0.686
KKQ71451.1
Hypothetical protein.
       0.620
KKQ72261.1
Hypothetical protein.
  
     0.569
KKQ71452.1
Hypothetical protein.
       0.559
KKQ71346.1
Ig family protein.
   
  0.525
KKQ70446.1
Hypothetical protein.
   
  0.514
KKQ71453.1
Capsule synthesis protein, CapA.
 
     0.488
Your Current Organism:
Peregrinibacteria bacterium GW2011GWA23836
NCBI taxonomy Id: 1619055
Other names: C. Peregrinibacteria bacterium GW2011_GWA2_38_36, Candidatus Peregrinibacteria bacterium GW2011_GWA2_38_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.