STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ71330.1Phenylalanine-tRNA ligase beta subunit. (920 aa)    
Predicted Functional Partners:
KKQ71329.1
Phenylalanine-tRNA ligase alpha subunit.
 
 0.999
KKQ69702.1
Leucine-tRNA ligase.
  
  
 0.986
KKQ71945.1
50S ribosomal protein L15.
  
  
 0.984
KKQ71971.1
DNA-directed RNA polymerase subunit beta.
  
  
 0.980
KKQ72252.1
Bifunctional GMP synthase/glutamine amidotransferase protein.
  
 
 0.923
KKQ69855.1
Methionine-tRNA ligase.
  
 
 0.915
KKQ71940.1
30S ribosomal protein S13.
  
 
 0.844
KKQ71959.1
Ribosomal protein S19.
  
 
 0.830
KKQ71957.1
30S ribosomal protein S3.
  
 
 0.824
KKQ71946.1
30S ribosomal protein S5.
  
 
 0.818
Your Current Organism:
Peregrinibacteria bacterium GW2011GWA23836
NCBI taxonomy Id: 1619055
Other names: C. Peregrinibacteria bacterium GW2011_GWA2_38_36, Candidatus Peregrinibacteria bacterium GW2011_GWA2_38_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.