STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ71339.1Methyltransferase type 11. (215 aa)    
Predicted Functional Partners:
KKQ71603.1
Long-chain-fatty-acyl-CoA reductase., Phenylacetate-CoA ligase.
  
 
 0.692
KKQ71601.1
Methylase involved in ubiquinone/menaquinone biosynthesis.
  
 0.548
KKQ71828.1
Methionine adenosyltransferase.
  
 
 0.497
KKQ71829.1
Adenosylhomocysteinase.
    
  0.496
KKQ71657.1
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
    
  0.493
KKQ71943.1
Adenylate kinase.
    
  0.489
KKQ71609.1
Hypothetical protein.
   
 0.482
KKQ72209.1
UDP-N-acetylmuramoylalanine-D-glutamate ligase.
    
  0.450
KKQ72126.1
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase.
    
  0.424
KKQ71927.1
Ribosomal RNA small subunit methyltransferase A.
    
 0.423
Your Current Organism:
Peregrinibacteria bacterium GW2011GWA23836
NCBI taxonomy Id: 1619055
Other names: C. Peregrinibacteria bacterium GW2011_GWA2_38_36, Candidatus Peregrinibacteria bacterium GW2011_GWA2_38_36
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