STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ70887.1Ribonuclease HII. (197 aa)    
Predicted Functional Partners:
KKQ72115.1
Polymerase III subunit beta protein.
   
 
 0.778
KKQ70888.1
Pyruvyl-transferase.
       0.773
KKQ72194.1
Polymerase I protein.
  
 
 0.761
KKQ70889.1
Hypothetical protein.
       0.628
KKQ71279.1
DnaQ exonuclease/DinG helicase family protein.
  
  
 0.611
KKQ71280.1
Polymerase III, epsilon subunit protein.
  
  
 0.611
KKQ71416.1
Ribonuclease H.
   
 
 0.604
KKQ70886.1
50S ribosomal protein L19.
     
 0.591
KKQ71843.1
Protein RecA.
  
 
 0.569
KKQ70890.1
Hypothetical protein.
       0.541
Your Current Organism:
Peregrinibacteria bacterium GW2011GWA23836
NCBI taxonomy Id: 1619055
Other names: C. Peregrinibacteria bacterium GW2011_GWA2_38_36, Candidatus Peregrinibacteria bacterium GW2011_GWA2_38_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.