STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ70653.1RNA polymerase sigma factor, sigma-70 family. (333 aa)    
Predicted Functional Partners:
KKQ71959.1
Ribosomal protein S19.
    
  0.999
KKQ71934.1
30S ribosomal protein S9.
   
 0.997
KKQ71969.1
30S ribosomal protein S12.
   
 0.997
KKQ71938.1
30S ribosomal protein S4.
  
  0.996
KKQ71939.1
30S ribosomal protein S11.
   
  0.996
KKQ71946.1
30S ribosomal protein S5.
    
 0.996
KKQ71949.1
30S ribosomal protein S8.
    
  0.996
KKQ71950.1
30S ribosomal protein S14 type Z.
    
  0.996
KKQ71954.1
30S ribosomal protein S17.
    
  0.996
KKQ71956.1
50S ribosomal protein L16.
    
  0.996
Your Current Organism:
Peregrinibacteria bacterium GW2011GWA23836
NCBI taxonomy Id: 1619055
Other names: C. Peregrinibacteria bacterium GW2011_GWA2_38_36, Candidatus Peregrinibacteria bacterium GW2011_GWA2_38_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.