STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKR96657.1Hypothetical protein. (473 aa)    
Predicted Functional Partners:
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 0.913
KKR97247.1
Tetratricopeptide TPR_2 repeat protein.
  
 0.898
KKR95799.1
NUDIX hydrolase.
  
 
  0.714
KKR95801.1
NUDIX hydrolase.
  
 
  0.714
KKR95802.1
NUDIX hydrolase.
  
 
  0.714
KKR96655.1
ATP synthase F0, C subunit.
 
   
 0.661
KKR95711.1
Hypothetical protein.
  
     0.641
KKR96796.1
Hypothetical protein.
    
  0.618
KKR96710.1
Hypothetical protein.
    
  0.618
KKR96146.1
Hypothetical protein.
 
   0.587
Your Current Organism:
candidate division TM6 bacterium GW2011GWE24116
NCBI taxonomy Id: 1619075
Other names: c. division TM6 bacterium GW2011_GWE2_41_16, candidate division TM6 bacterium GW2011_GWE2_41_16
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