STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKP35993.1Membrane protease subunit, stomatin/prohibitin. (265 aa)    
Predicted Functional Partners:
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.927
KKP35461.1
ATP-dependent zinc metalloprotease FtsH.
  
 0.927
KKP36000.1
Putative proteinase.
 
 0.732
mnmE
tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
       0.676
KKP35991.1
Hypothetical protein.
       0.632
KKP35460.1
Thioredoxin reductase.
  
 
 0.533
KKP35073.1
CdcH.
   
 0.485
KKP35860.1
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
  0.436
KKP35881.1
Phospholipase D/Transphosphatidylase.
 
  
  0.423
KKP35357.1
Hypothetical protein.
  
 0.417
Your Current Organism:
candidate division TM6 bacterium GW2011GWF23272
NCBI taxonomy Id: 1619079
Other names: c. division TM6 bacterium GW2011_GWF2_32_72, candidate division TM6 bacterium GW2011_GWF2_32_72
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