Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKQ49171.1 | KKQ49172.1 | US69_C0008G0001 | US69_C0008G0002 | Type IV pilus inner membrane protein MshG. | Hypothetical protein. | 0.536 |
KKQ49171.1 | KKQ49173.1 | US69_C0008G0001 | US69_C0008G0003 | Type IV pilus inner membrane protein MshG. | Polymerase, beta domain protein region protein. | 0.419 |
KKQ49171.1 | KKQ49174.1 | US69_C0008G0001 | US69_C0008G0004 | Type IV pilus inner membrane protein MshG. | HEPN domain protein. | 0.419 |
KKQ49172.1 | KKQ49171.1 | US69_C0008G0002 | US69_C0008G0001 | Hypothetical protein. | Type IV pilus inner membrane protein MshG. | 0.536 |
KKQ49172.1 | KKQ49173.1 | US69_C0008G0002 | US69_C0008G0003 | Hypothetical protein. | Polymerase, beta domain protein region protein. | 0.588 |
KKQ49172.1 | KKQ49174.1 | US69_C0008G0002 | US69_C0008G0004 | Hypothetical protein. | HEPN domain protein. | 0.588 |
KKQ49173.1 | KKQ49171.1 | US69_C0008G0003 | US69_C0008G0001 | Polymerase, beta domain protein region protein. | Type IV pilus inner membrane protein MshG. | 0.419 |
KKQ49173.1 | KKQ49172.1 | US69_C0008G0003 | US69_C0008G0002 | Polymerase, beta domain protein region protein. | Hypothetical protein. | 0.588 |
KKQ49173.1 | KKQ49174.1 | US69_C0008G0003 | US69_C0008G0004 | Polymerase, beta domain protein region protein. | HEPN domain protein. | 0.886 |
KKQ49174.1 | KKQ49171.1 | US69_C0008G0004 | US69_C0008G0001 | HEPN domain protein. | Type IV pilus inner membrane protein MshG. | 0.419 |
KKQ49174.1 | KKQ49172.1 | US69_C0008G0004 | US69_C0008G0002 | HEPN domain protein. | Hypothetical protein. | 0.588 |
KKQ49174.1 | KKQ49173.1 | US69_C0008G0004 | US69_C0008G0003 | HEPN domain protein. | Polymerase, beta domain protein region protein. | 0.886 |