STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJC51022.1Glutamine cyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)    
Predicted Functional Partners:
KJC51021.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
KJC51575.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.663
KJC52911.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
KJC47230.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
KJC44859.1
Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
KJC44863.1
2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
KJC41493.1
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
KJC40308.1
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
KJC39389.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
KJC36661.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
Your Current Organism:
Bradyrhizobium sp. LTSP885
NCBI taxonomy Id: 1619232
Other names: B. sp. LTSP885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.