STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJC45008.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)    
Predicted Functional Partners:
KJC46694.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
KJC35623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
KJC40497.1
Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.539
KJC37192.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
KJC40856.1
Peptidase S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.438
KJC36099.1
Phenylacetaldoxime dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
KJC33884.1
Apple domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
KJC36110.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.408
KJC37186.1
Carotenoid oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.406
KJC49678.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.400
Your Current Organism:
Bradyrhizobium sp. LTSP885
NCBI taxonomy Id: 1619232
Other names: B. sp. LTSP885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.