STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP94866.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (275 aa)    
Predicted Functional Partners:
SCP96665.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.912
SCP98143.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.883
SCP99106.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.883
SCP94865.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.872
accD
acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 
 0.843
SCP95950.1
PTS system, D-glucosamine-specific IIC component.
     
 0.806
SCP97277.1
PTS system, beta-glucosides-specific IIC component.
     
 0.806
SCP97366.1
PTS system, fructose-specific IIC component.
  
 0.784
SCP97955.1
Ribose 5-phosphate isomerase B.
  
 
 0.758
SCP96393.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.746
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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