STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP94868.1Signal transduction histidine kinase. (358 aa)    
Predicted Functional Partners:
SCP95632.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.980
SCP94867.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.978
SCP97336.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.930
SCP98562.1
Two-component system, OmpR family, response regulator.
 0.930
SCP99386.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.926
SCP94838.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.916
SCP98119.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.913
SCP96482.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.908
SCP97114.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.895
SCP95099.1
Chemotaxis protein methyltransferase CheR.
   
 0.894
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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