STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP95829.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (327 aa)    
Predicted Functional Partners:
SCP95827.1
Peptide/nickel transport system permease protein.
 
 0.999
SCP95138.1
Peptide/nickel transport system permease protein.
 
 0.997
SCP97282.1
Oligopeptide transport system permease protein.
 
 0.997
SCP95826.1
Peptide/nickel transport system permease protein.
 
 0.992
SCP97281.1
Oligopeptide transport system permease protein.
 
 0.982
SCP95139.1
Peptide/nickel transport system permease protein.
 
 0.977
SCP97286.1
Oligopeptide transport system substrate-binding protein.
 
 0.956
SCP95825.1
ABC-type transport system, substrate-binding protein.
 
 0.948
SCP97285.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.921
SCP96403.1
Energy-coupling factor transport system ATP-binding protein.
 
 
0.864
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.