STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP96004.1Glycosyltransferase involved in cell wall bisynthesis. (338 aa)    
Predicted Functional Partners:
SCP96005.1
UDP-galactopyranose mutase.
 
  
 0.898
SCP96002.1
PAP2 superfamily protein.
 
  
 0.580
SCP97574.1
Hypothetical protein.
 
     0.547
SCP96261.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.542
SCP96227.1
UDP-galactopyranose mutase.
 
  
 0.532
SCP95765.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.516
SCP96877.1
Hypothetical protein.
 
     0.508
SCP96890.1
Hypothetical protein.
 
     0.481
SCP96006.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
       0.474
SCP96007.1
Sensor histidine kinase YesM.
       0.474
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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