STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP96455.1Fumarate hydratase subunit alpha. (281 aa)    
Predicted Functional Partners:
SCP96456.1
Fumarate hydratase subunit beta.
 
 0.997
SCP98167.1
L(+)-tartrate dehydratase beta subunit.
 
 0.992
SCP95319.1
L(+)-tartrate dehydratase beta subunit.
 
 0.989
SCP96966.1
Fumarate hydratase subunit beta.
 
 0.989
SCP98467.1
Fumarate reductase flavoprotein subunit.
  
 
 0.862
SCP95081.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.840
SCP95805.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 
 0.790
SCP95106.1
Oxaloacetate decarboxylase, alpha subunit.
    
 0.758
SCP95084.1
Phosphoenolpyruvate carboxykinase (ATP).
   
 
 0.748
argH
Argininosuccinate lyase.
    
  0.746
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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