STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP96513.1Stage II sporulation protein E (SpoIIE). (391 aa)    
Predicted Functional Partners:
SCP95312.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 0.979
SCP95632.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.959
SCP97823.1
HD domain-containing protein.
  
 
 0.933
SCP96511.1
Hypothetical protein.
 
    0.926
SCP96512.1
Iron only hydrogenase large subunit, C-terminal domain.
 
     0.924
SCP95707.1
Flagellar protein FlgJ.
   
    0.914
SCP96515.1
Ferredoxin hydrogenase large subunit.
 
     0.869
SCP99193.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 
 0.828
SCP97300.1
2-iminoacetate synthase.
  
  
 0.822
SCP95936.1
Flagellar motor switch protein FliG.
  
    0.804
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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