STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP97245.1Raffinose/stachyose/melibiose transport system substrate-binding protein. (461 aa)    
Predicted Functional Partners:
SCP97246.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.920
SCP97247.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.882
SCP96384.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.874
SCP97248.1
ADP-ribosylglycohydrolase.
 
     0.846
SCP97249.1
ADP-ribosylglycohydrolase.
 
     0.843
SCP97250.1
Sugar or nucleoside kinase, ribokinase family.
 
    0.841
SCP97251.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
 
    0.838
SCP97256.1
Nucleoside 2-deoxyribosyltransferase.
 
     0.827
SCP97516.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
     0.735
SCP98918.1
Multiple sugar transport system permease protein/sn-glycerol 3-phosphate transport system permease protein.
  
  0.703
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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