STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP98759.1DNA-binding response regulator, LytR/AlgR family. (234 aa)    
Predicted Functional Partners:
SCP98758.1
Hypothetical protein.
 
  
  0.941
SCP96007.1
Sensor histidine kinase YesM.
 
 0.898
SCP98983.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
 
 
  0.883
SCP98674.1
GHKL domain-containing protein.
 
 
 0.867
SCP96489.1
Two-component system, sensor histidine kinase YesM.
 
 0.837
SCP96897.1
Two-component system, LytT family, sensor kinase/two-component system, LytT family, sensor histidine kinase LytS.
 
 0.830
SCP97689.1
Sensor histidine kinase YesM.
  
 
  0.806
SCP96883.1
GHKL domain-containing protein.
 
 
  0.802
SCP97002.1
GHKL domain-containing protein.
 
 
  0.795
SCP98728.1
GHKL domain-containing protein.
 
  
  0.795
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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