STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP98833.1Protein of unknown function; Belongs to the glycosyl hydrolase 2 family. (839 aa)    
Predicted Functional Partners:
SCP98834.1
alpha-L-rhamnosidase.
 
    0.818
SCP98836.1
Inosine-uridine preferring nucleoside hydrolase.
       0.773
SCP98837.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
       0.718
SCP98838.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
       0.656
SCP98832.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family/probable glucitol transport protein GutA.
 
    0.578
SCP96994.1
alpha-L-rhamnosidase.
  0.575
SCP96972.1
alpha-L-rhamnosidase.
  0.573
SCP96100.1
Alpha-L-fucosidase.
 
   
 0.568
SCP99836.1
alpha-L-rhamnosidase.
  0.564
SCP97693.1
alpha-L-rhamnosidase.
  0.556
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.