STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP99382.1Cystathione beta-lyase. (391 aa)    
Predicted Functional Partners:
SCP95133.1
Homocysteine S-methyltransferase.
  
 0.995
SCP95132.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.984
SCP95322.1
Cysteine synthase A.
  
 0.984
SCP97561.1
Cysteine synthase A.
  
 0.984
SCP95318.1
Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.
  
 0.976
SCP99381.1
Cystathionine gamma-synthase.
 
 
 0.971
SCP98997.1
Homoserine dehydrogenase.
  
 
 0.948
SCP95357.1
Peroxiredoxin family protein.
  
 
 0.947
SCP96086.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
  
 
 0.947
SCP95326.1
O-acetylhomoserine (thiol)-lyase.
 
 
 0.932
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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